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Allermatch allergen finder: Input Form

This webpage has three analysis modi to identify a relationship between your input sequence and an allergen from the database

  • 80 amino acids sliding window. The input sequence is chopped up in 80 amino acids windows. For each 80 amino acids window, the program counts which allergen it hits (with an specific identity).
  • Full Alignment: Use Fasta to perform a full alignment.
  • Wordmatch: Look for an exact hit of 6 amino acids in a sequence in the database

    Copy Paste your Amino Acid sequence here:
    Algorithm:
    Do an 80 amino acids sliding window alignment Cutoff Percentage (only applicable to the 80 amino acids sliding window)
    Look for a small exact wordmatch Wordlength (only applicable to the exact wordmatch search)
    Do a full fasta alignment
    Select a database:

    • Questions: Dr. Gijs Kleter
    Updated: UniProt, December 4, 2007 (395 entries), WHO-IUIS December 21, 2007 (863 entries).